STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX84550.1Mg chelatase-related protein. (342 aa)    
Predicted Functional Partners:
EPX87379.1
DNA protecting protein DprA.
 
 0.906
EPX84358.1
Putative amidophosphoribosyltransferase.
 
  
 0.828
EPX84158.1
Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
   
   0.674
EPX86293.1
ComEC/Rec2-related protein.
 
  
 0.516
EPX84125.1
DNA repair protein radc; Belongs to the UPF0758 family.
  
  
 0.502
EPX82693.1
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein.
  
  
 0.437
EPX84152.1
Hypothetical protein; (DUF1217.
   
   0.431
EPX84159.1
Flagellar basal-body rod protein FlgG, Gram-negative bacteria; Belongs to the flagella basal body rod proteins family.
   
   0.431
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.417
EPX87246.1
Hypothetical protein.
   
    0.416
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.