Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EPX86312.1 | EPX86313.1 | ruthe_01126 | ruthe_01127 | Transketolase; Overlaps another CDS with the same product name. | Transketolase; Overlaps another CDS with the same product name. | 0.994 |
| EPX86312.1 | EPX86315.1 | ruthe_01126 | ruthe_01129 | Transketolase; Overlaps another CDS with the same product name. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.918 |
| EPX86312.1 | EPX87280.1 | ruthe_01126 | ruthe_00678 | Transketolase; Overlaps another CDS with the same product name. | 6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.849 |
| EPX86312.1 | EPX87357.1 | ruthe_01126 | ruthe_00756 | Transketolase; Overlaps another CDS with the same product name. | Phosphoglucomutase. | 0.776 |
| EPX86312.1 | EPX87772.1 | ruthe_01126 | ruthe_00175 | Transketolase; Overlaps another CDS with the same product name. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.839 |
| EPX86312.1 | EPX87775.1 | ruthe_01126 | ruthe_00178 | Transketolase; Overlaps another CDS with the same product name. | Triosephosphate isomerase. | 0.745 |
| EPX86312.1 | eno | ruthe_01126 | ruthe_01269 | Transketolase; Overlaps another CDS with the same product name. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.869 |
| EPX86312.1 | pgi | ruthe_01126 | ruthe_01244 | Transketolase; Overlaps another CDS with the same product name. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.916 |
| EPX86312.1 | tal | ruthe_01126 | ruthe_02402 | Transketolase; Overlaps another CDS with the same product name. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.967 |
| EPX86313.1 | EPX86312.1 | ruthe_01127 | ruthe_01126 | Transketolase; Overlaps another CDS with the same product name. | Transketolase; Overlaps another CDS with the same product name. | 0.994 |
| EPX86313.1 | EPX86315.1 | ruthe_01127 | ruthe_01129 | Transketolase; Overlaps another CDS with the same product name. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.918 |
| EPX86313.1 | EPX87280.1 | ruthe_01127 | ruthe_00678 | Transketolase; Overlaps another CDS with the same product name. | 6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.849 |
| EPX86313.1 | EPX87357.1 | ruthe_01127 | ruthe_00756 | Transketolase; Overlaps another CDS with the same product name. | Phosphoglucomutase. | 0.776 |
| EPX86313.1 | EPX87772.1 | ruthe_01127 | ruthe_00175 | Transketolase; Overlaps another CDS with the same product name. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.839 |
| EPX86313.1 | EPX87775.1 | ruthe_01127 | ruthe_00178 | Transketolase; Overlaps another CDS with the same product name. | Triosephosphate isomerase. | 0.745 |
| EPX86313.1 | eno | ruthe_01127 | ruthe_01269 | Transketolase; Overlaps another CDS with the same product name. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.869 |
| EPX86313.1 | pgi | ruthe_01127 | ruthe_01244 | Transketolase; Overlaps another CDS with the same product name. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.916 |
| EPX86313.1 | tal | ruthe_01127 | ruthe_02402 | Transketolase; Overlaps another CDS with the same product name. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.967 |
| EPX86315.1 | EPX86312.1 | ruthe_01129 | ruthe_01126 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transketolase; Overlaps another CDS with the same product name. | 0.918 |
| EPX86315.1 | EPX86313.1 | ruthe_01129 | ruthe_01127 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transketolase; Overlaps another CDS with the same product name. | 0.918 |
page 1 of 6