STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX84210.13-hydroxyacyl-CoA dehydrogenase. (291 aa)    
Predicted Functional Partners:
EPX83307.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.998
EPX84844.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.996
EPX83282.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.996
EPX87414.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.995
EPX83313.1
Enoyl-CoA hydratase/carnithine racemase.
 0.984
EPX83340.1
Acyl-CoA dehydrogenase.
 0.913
EPX87411.1
3-hydroxyacyl-CoA dehydrogenase.
 
0.890
EPX83216.1
3-hydroxyacyl-CoA dehydrogenase.
  
  
 
0.881
EPX83285.1
Acyl-CoA dehydrogenase.
 0.875
EPX87374.1
3-oxoacid CoA-transferase, B subunit.
  
 
 0.860
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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