Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EPX83782.1 | EPX83783.1 | ruthe_02579 | ruthe_02580 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | 0.981 |
| EPX83782.1 | EPX86099.1 | ruthe_02579 | ruthe_00907 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | Lipid A disaccharide synthetase; Belongs to the LpxB family. | 0.427 |
| EPX83782.1 | EPX86362.1 | ruthe_02579 | ruthe_01177 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.570 |
| EPX83782.1 | EPX87516.1 | ruthe_02579 | ruthe_00378 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | CMP-2-keto-3-deoxyoctulosonic acid synthetase. | 0.820 |
| EPX83782.1 | EPX87659.1 | ruthe_02579 | ruthe_00365 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | KpsF/GutQ family protein; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.962 |
| EPX83782.1 | lpxK | ruthe_02579 | ruthe_03340 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.506 |
| EPX83783.1 | EPX83782.1 | ruthe_02580 | ruthe_02579 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | 0.981 |
| EPX83783.1 | EPX86099.1 | ruthe_02580 | ruthe_00907 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | Lipid A disaccharide synthetase; Belongs to the LpxB family. | 0.669 |
| EPX83783.1 | EPX86362.1 | ruthe_02580 | ruthe_01177 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.783 |
| EPX83783.1 | EPX87215.1 | ruthe_02580 | ruthe_00612 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | Lauroyl/myristoyl acyltransferase. | 0.604 |
| EPX83783.1 | EPX87516.1 | ruthe_02580 | ruthe_00378 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | CMP-2-keto-3-deoxyoctulosonic acid synthetase. | 0.898 |
| EPX83783.1 | EPX87659.1 | ruthe_02580 | ruthe_00365 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | KpsF/GutQ family protein; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.970 |
| EPX83783.1 | lpxA | ruthe_02580 | ruthe_00905 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.783 |
| EPX83783.1 | lpxC | ruthe_02580 | ruthe_00823 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | 0.779 |
| EPX83783.1 | lpxD | ruthe_02580 | ruthe_00994 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.767 |
| EPX83783.1 | lpxK | ruthe_02580 | ruthe_03340 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.811 |
| EPX86099.1 | EPX83782.1 | ruthe_00907 | ruthe_02579 | Lipid A disaccharide synthetase; Belongs to the LpxB family. | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | 0.427 |
| EPX86099.1 | EPX83783.1 | ruthe_00907 | ruthe_02580 | Lipid A disaccharide synthetase; Belongs to the LpxB family. | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name. | 0.669 |
| EPX86099.1 | EPX86362.1 | ruthe_00907 | ruthe_01177 | Lipid A disaccharide synthetase; Belongs to the LpxB family. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.781 |
| EPX86099.1 | EPX87215.1 | ruthe_00907 | ruthe_00612 | Lipid A disaccharide synthetase; Belongs to the LpxB family. | Lauroyl/myristoyl acyltransferase. | 0.837 |
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