STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX83092.1ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component. (329 aa)    
Predicted Functional Partners:
EPX83088.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.986
EPX83090.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.984
EPX83091.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.984
EPX83084.1
Dihydropyrimidinase.
 
    0.821
EPX87734.1
Nitrate transport ATP-binding subunit C and D.
  
 
 0.818
EPX83314.1
PAS domain S-box.
   
 0.792
EPX87735.1
Nitrate ABC transporter, permease protein.
 
 
 0.755
EPX83251.1
Dihydrouracil dehydrogenase (NAD+)/dihydropyrimidine dehydrogenase (NADP+).
 
     0.748
EPX83089.1
Hypothetical protein.
       0.697
EPX83814.1
Diguanylate cyclase (GGDEF) domain protein.
 
      0.696
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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