STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX83145.1Putative signal-transduction protein; Containing cAMP-binding and CBS domains; overlaps another CDS with the same product name. (186 aa)    
Predicted Functional Partners:
EPX83146.1
Putative signal-transduction protein; Containing cAMP-binding and CBS domains; overlaps another CDS with the same product name.
     0.994
EPX83147.1
Exonuclease, DNA polymerase III, epsilon subunit family.
 
  
  0.946
EPX83149.1
Putative sodium:solute symporter subfamily; VC_2705; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.923
EPX86073.1
GMP synthase (glutamine-hydrolyzing); C-terminal domain or B subunit.
    
 0.851
EPX84529.1
Glutamate synthase domain 1.
    
 0.819
EPX84530.1
Glutamate synthase domain 2.
    
 0.819
EPX83148.1
Hypothetical protein.
 
     0.810
EPX83314.1
PAS domain S-box.
    
 0.791
EPX86061.1
IMP dehydrogenase/GMP reductase.
    
 0.788
EPX83150.1
Putative solute:sodium symporter small subunit.
 
     0.779
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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