STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX83267.1ABC-type spermidine/putrescine transport system, permease component II. (260 aa)    
Predicted Functional Partners:
EPX83268.1
ABC-type uncharacterized transport system, permease component.
 
 
  0.994
EPX83269.1
ABC-type Fe3+ transport system, periplasmic component.
 
  
  0.984
EPX83266.1
ABC-type spermidine/putrescine transport system, ATPase component.
 
 
  0.969
EPX87618.1
Spermidine/putrescine-binding periplasmic protein.
   
 
  0.797
EPX84272.1
Spermidine/putrescine-binding periplasmic protein.
   
 
  0.797
EPX83697.1
Spermidine/putrescine-binding periplasmic protein.
   
 
  0.797
EPX83265.1
Putative metal-dependent phosphoesterase (PHP family).
       0.706
EPX86215.1
ABC-type spermidine/putrescine transport system, permease component I.
   
 
  0.610
EPX84859.1
ABC-type spermidine/putrescine transport system, permease component I.
   
 
  0.610
EPX84510.1
ABC-type spermidine/putrescine transport system, permease component I.
   
 
  0.610
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.