STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX83338.1Hypothetical protein. (164 aa)    
Predicted Functional Partners:
EPX83339.1
Hypothetical protein.
     0.952
EPX87541.1
Membrane-bound metallopeptidase.
 
 
   0.789
EPX82780.1
Hypothetical protein.
  
     0.773
EPX84124.1
Hypothetical protein.
  
     0.769
ribB
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.760
EPX83829.1
Hint domain protein.
  
     0.754
EPX87550.1
Hypothetical protein.
  
     0.748
EPX82781.1
Hypothetical protein.
  
     0.746
EPX86501.1
Putative peptidoglycan binding domain protein.
 
     0.738
EPX84868.1
DNA-binding winged-HTH domain protein.
  
     0.738
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.