STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX82956.1Phage major capsid protein E. (337 aa)    
Predicted Functional Partners:
EPX82953.1
Phage portal protein, lambda family.
 
     0.941
EPX82954.1
Protease subunit of ATP-dependent Clp protease; Belongs to the peptidase S14 family.
 
     0.939
EPX82955.1
Bacteriophage lambda head decoration protein D.
 
     0.934
EPX82951.1
Bacteriophage tail assembly protein.
 
     0.877
EPX84317.1
Phage portal protein, lambda family.
 
     0.818
EPX84318.1
Bacteriophage lambda head decoration protein D.
 
     0.797
EPX82952.1
Hypothetical protein.
       0.701
EPX84315.1
Bacteriophage tail assembly protein.
 
     0.626
EPX82941.1
Hypothetical protein.
  
     0.452
EPX82931.1
Putative P-loop ATPase.
  
     0.451
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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