STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378105_00127Unannotated protein. (613 aa)    
Predicted Functional Partners:
GCA_000378105_00905
Unannotated protein.
  
 
 0.933
GCA_000378105_00126
Unannotated protein.
  
   0.790
GCA_000378105_01752
Unannotated protein.
    
  0.758
GCA_000378105_00721
Unannotated protein.
  
 
 0.689
GCA_000378105_00749
Unannotated protein.
  
 
 0.689
GCA_000378105_02419
Unannotated protein.
  
 
 0.689
GCA_000378105_01461
Unannotated protein.
   
  0.680
GCA_000378105_01537
Unannotated protein.
   
  0.680
GCA_000378105_00202
Unannotated protein.
    
 0.644
GCA_000378105_00204
Unannotated protein.
    
 0.644
Your Current Organism:
Rubritalea marina
NCBI taxonomy Id: 1123070
Other names: R. marina DSM 17716, Rubritalea marina DSM 17716
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.