STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378105_00951Unannotated protein. (425 aa)    
Predicted Functional Partners:
GCA_000378105_01856
Unannotated protein.
   
  0.842
GCA_000378105_01601
Unannotated protein.
   
  0.833
GCA_000378105_01850
Unannotated protein.
   
  0.828
GCA_000378105_02628
Unannotated protein.
   
  0.818
GCA_000378105_00421
Unannotated protein.
    
  0.802
GCA_000378105_01502
Unannotated protein.
    
  0.801
GCA_000378105_01855
Unannotated protein.
   
  0.801
GCA_000378105_00643
Unannotated protein.
   
  0.794
GCA_000378105_01501
Unannotated protein.
    
  0.793
GCA_000378105_02215
Unannotated protein.
   
  0.792
Your Current Organism:
Rubritalea marina
NCBI taxonomy Id: 1123070
Other names: R. marina DSM 17716, Rubritalea marina DSM 17716
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.