STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378105_01928Unannotated protein. (310 aa)    
Predicted Functional Partners:
GCA_000378105_01927
Unannotated protein.
 
     0.791
GCA_000378105_01931
Unannotated protein.
 
     0.609
GCA_000378105_01929
Unannotated protein.
       0.601
GCA_000378105_01930
Unannotated protein.
       0.542
GCA_000378105_00399
Unannotated protein.
  
     0.505
GCA_000378105_00709
Unannotated protein.
  
     0.473
GCA_000378105_02005
Unannotated protein.
  
     0.463
GCA_000378105_01926
Unannotated protein.
       0.446
Your Current Organism:
Rubritalea marina
NCBI taxonomy Id: 1123070
Other names: R. marina DSM 17716, Rubritalea marina DSM 17716
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.