STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378105_01963Unannotated protein. (359 aa)    
Predicted Functional Partners:
GCA_000378105_00628
Unannotated protein.
 
 0.999
GCA_000378105_01212
Unannotated protein.
 0.999
GCA_000378105_00209
Unannotated protein.
 
 0.997
GCA_000378105_01088
Unannotated protein.
   
   0.955
GCA_000378105_00568
Unannotated protein.
    
 0.864
GCA_000378105_00986
Unannotated protein.
    
 0.864
GCA_000378105_00672
Unannotated protein.
   
 0.823
GCA_000378105_02661
Unannotated protein.
    
  0.808
GCA_000378105_01522
Unannotated protein.
    
  0.782
GCA_000378105_00967
Unannotated protein.
    
  0.780
Your Current Organism:
Rubritalea marina
NCBI taxonomy Id: 1123070
Other names: R. marina DSM 17716, Rubritalea marina DSM 17716
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.