STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425365_01255Unannotated protein. (491 aa)    
Predicted Functional Partners:
GCA_000425365_01254
Unannotated protein.
 
 0.999
GCA_000425365_01256
Unannotated protein.
 0.999
GCA_000425365_00534
Unannotated protein.
  
  
 
0.892
GCA_000425365_02814
Unannotated protein.
  
  
 
0.887
GCA_000425365_00667
Unannotated protein.
  
  
 
0.795
GCA_000425365_03092
Unannotated protein.
  
  
 
0.787
GCA_000425365_02545
Unannotated protein.
  
  
 
0.730
GCA_000425365_00975
Unannotated protein.
    
 0.685
GCA_000425365_02173
Unannotated protein.
   
 
  0.676
GCA_000425365_02146
Unannotated protein.
   
 
  0.674
Your Current Organism:
Rubritepida flocculans
NCBI taxonomy Id: 1123072
Other names: R. flocculans DSM 14296, Rubritepida flocculans DSM 14296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.