STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425365_01927Unannotated protein. (551 aa)    
Predicted Functional Partners:
GCA_000425365_01930
Unannotated protein.
 
     0.813
GCA_000425365_01928
Unannotated protein.
       0.778
GCA_000425365_01929
Unannotated protein.
       0.778
GCA_000425365_01931
Unannotated protein.
 
     0.742
GCA_000425365_01932
Unannotated protein.
       0.672
GCA_000425365_01933
Unannotated protein.
       0.672
GCA_000425365_01934
Unannotated protein.
       0.667
GCA_000425365_01926
Unannotated protein.
  
    0.554
GCA_000425365_03055
Unannotated protein.
 
     0.509
GCA_000425365_01923
Unannotated protein.
       0.480
Your Current Organism:
Rubritepida flocculans
NCBI taxonomy Id: 1123072
Other names: R. flocculans DSM 14296, Rubritepida flocculans DSM 14296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.