STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378125_01744Unannotated protein. (343 aa)    
Predicted Functional Partners:
GCA_000378125_01742
Unannotated protein.
 
0.989
GCA_000378125_01741
Unannotated protein.
 
 
 0.986
GCA_000378125_01743
Unannotated protein.
 
 
 0.975
GCA_000378125_01745
Unannotated protein.
  
    0.955
GCA_000378125_01578
Unannotated protein.
 
 
 0.934
GCA_000378125_01746
Unannotated protein.
 
    0.910
GCA_000378125_00479
Unannotated protein.
 
   
 0.854
GCA_000378125_03712
Unannotated protein.
 
  
 0.851
GCA_000378125_03367
Unannotated protein.
  
 
 0.849
GCA_000378125_03510
Unannotated protein.
 
   
 0.845
Your Current Organism:
Rudaea cellulosilytica
NCBI taxonomy Id: 1123073
Other names: R. cellulosilytica DSM 22992, Rudaea cellulosilytica DSM 22992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.