STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378125_03506Unannotated protein. (370 aa)    
Predicted Functional Partners:
GCA_000378125_02065
Unannotated protein.
 
 0.977
GCA_000378125_03501
Unannotated protein.
 
  
 0.820
GCA_000378125_02066
Unannotated protein.
 
 
 0.805
GCA_000378125_03386
Unannotated protein.
 
  
 0.703
GCA_000378125_00022
Unannotated protein.
    
 0.700
GCA_000378125_00705
Unannotated protein.
    
  0.668
GCA_000378125_03502
Unannotated protein.
 
     0.594
GCA_000378125_01615
Unannotated protein.
 
  
 0.582
GCA_000378125_03504
Unannotated protein.
 
   
 0.579
GCA_000378125_03505
Unannotated protein.
       0.572
Your Current Organism:
Rudaea cellulosilytica
NCBI taxonomy Id: 1123073
Other names: R. cellulosilytica DSM 22992, Rudaea cellulosilytica DSM 22992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.