STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425525_01202Unannotated protein. (131 aa)    
Predicted Functional Partners:
GCA_000425525_01203
Unannotated protein.
 
  
 0.897
GCA_000425525_00849
Unannotated protein.
 
  
 0.842
GCA_000425525_00220
Unannotated protein.
  
  
 0.833
GCA_000425525_00219
Unannotated protein.
 
  
 0.664
GCA_000425525_01120
Unannotated protein.
  
  
 0.656
GCA_000425525_00072
Unannotated protein.
  
  
 0.644
GCA_000425525_01204
Unannotated protein.
       0.499
GCA_000425525_00725
Unannotated protein.
     
 0.447
GCA_000425525_00113
Unannotated protein.
  
  
 0.410
GCA_000425525_02030
Unannotated protein.
   
  
 0.409
Your Current Organism:
Ruminococcus gauvreauii
NCBI taxonomy Id: 1123075
Other names: R. gauvreauii DSM 19829, Ruminococcus gauvreauii DSM 19829
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.