STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000482465_02641Unannotated protein. (212 aa)    
Predicted Functional Partners:
GCA_000482465_01519
Unannotated protein.
   
 
 0.876
GCA_000482465_02087
Unannotated protein.
  
  
  0.876
GCA_000482465_05473
Unannotated protein.
   
 0.866
GCA_000482465_01978
Unannotated protein.
 
  0.827
GCA_000482465_02640
Unannotated protein.
  
    0.821
GCA_000482465_04478
Unannotated protein.
 
  0.811
GCA_000482465_03858
Unannotated protein.
     
 0.787
GCA_000482465_02639
Unannotated protein.
  
    0.690
GCA_000482465_05471
Unannotated protein.
  
 0.662
GCA_000482465_04957
Unannotated protein.
  
 0.657
Your Current Organism:
Runella limosa
NCBI taxonomy Id: 1123077
Other names: R. limosa DSM 17973, Runella limosa DSM 17973
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.