STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423565_00097Unannotated protein. (109 aa)    
Predicted Functional Partners:
GCA_000423565_05025
Unannotated protein.
 
  
 0.835
GCA_000423565_05260
Unannotated protein.
 
    0.759
GCA_000423565_02944
Unannotated protein.
  
    0.554
GCA_000423565_01441
Unannotated protein.
  
  
 0.543
GCA_000423565_01877
Unannotated protein.
  
  
 0.516
GCA_000423565_03850
Unannotated protein.
  
  
 0.516
GCA_000423565_05447
Unannotated protein.
  
  
 0.516
GCA_000423565_00096
Unannotated protein.
       0.488
GCA_000423565_05261
Unannotated protein.
 
    0.480
GCA_000423565_04618
Unannotated protein.
 
    0.427
Your Current Organism:
Runella zeae
NCBI taxonomy Id: 1123078
Other names: R. zeae DSM 19591, Runella zeae DSM 19591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.