STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378145_01311Unannotated protein. (342 aa)    
Predicted Functional Partners:
GCA_000378145_01312
Unannotated protein.
       0.762
GCA_000378145_01536
Unannotated protein.
  
   0.756
GCA_000378145_02145
Unannotated protein.
  
     0.724
GCA_000378145_00538
Unannotated protein.
  
     0.696
GCA_000378145_00130
Unannotated protein.
  
     0.689
GCA_000378145_02965
Unannotated protein.
  
     0.663
GCA_000378145_03605
Unannotated protein.
  
     0.663
GCA_000378145_00662
Unannotated protein.
 
   0.661
GCA_000378145_01542
Unannotated protein.
  
     0.661
GCA_000378145_01712
Unannotated protein.
  
     0.636
Your Current Organism:
Saccharibacillus kuerlensis
NCBI taxonomy Id: 1123226
Other names: S. kuerlensis DSM 22868, Saccharibacillus kuerlensis DSM 22868
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.