STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378145_01585Unannotated protein. (275 aa)    
Predicted Functional Partners:
GCA_000378145_00601
Unannotated protein.
    
 0.773
GCA_000378145_01455
Unannotated protein.
    
  0.637
GCA_000378145_01700
Unannotated protein.
  
 
 0.636
GCA_000378145_03497
Unannotated protein.
  
     0.572
GCA_000378145_02269
Unannotated protein.
  
  
  0.568
GCA_000378145_03827
Unannotated protein.
  
     0.566
GCA_000378145_02211
Unannotated protein.
  
     0.565
GCA_000378145_03342
Unannotated protein.
  
 
  0.559
GCA_000378145_01707
Unannotated protein.
  
 
  0.546
GCA_000378145_00192
Unannotated protein.
  
 
 0.524
Your Current Organism:
Saccharibacillus kuerlensis
NCBI taxonomy Id: 1123226
Other names: S. kuerlensis DSM 22868, Saccharibacillus kuerlensis DSM 22868
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.