STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378145_03189Unannotated protein. (318 aa)    
Predicted Functional Partners:
GCA_000378145_03275
Unannotated protein.
  
    0.592
GCA_000378145_03273
Unannotated protein.
  
    0.580
GCA_000378145_03188
Unannotated protein.
       0.464
GCA_000378145_03274
Unannotated protein.
  
    0.448
GCA_000378145_03190
Unannotated protein.
       0.446
GCA_000378145_03191
Unannotated protein.
       0.446
GCA_000378145_00681
Unannotated protein.
   
    0.400
GCA_000378145_01267
Unannotated protein.
   
    0.400
GCA_000378145_02495
Unannotated protein.
   
    0.400
GCA_000378145_03343
Unannotated protein.
   
    0.400
Your Current Organism:
Saccharibacillus kuerlensis
NCBI taxonomy Id: 1123226
Other names: S. kuerlensis DSM 22868, Saccharibacillus kuerlensis DSM 22868
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.