STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378145_03451Unannotated protein. (247 aa)    
Predicted Functional Partners:
GCA_000378145_02982
Unannotated protein.
  
 
  0.986
GCA_000378145_02566
Unannotated protein.
    
 0.763
GCA_000378145_02969
Unannotated protein.
  
    0.763
GCA_000378145_02968
Unannotated protein.
  
    0.693
GCA_000378145_03450
Unannotated protein.
       0.582
GCA_000378145_00148
Unannotated protein.
      0.544
GCA_000378145_00626
Unannotated protein.
  
 
 0.511
GCA_000378145_01735
Unannotated protein.
 
  
 0.509
GCA_000378145_02453
Unannotated protein.
 
  
  0.494
GCA_000378145_03452
Unannotated protein.
     
 0.473
Your Current Organism:
Saccharibacillus kuerlensis
NCBI taxonomy Id: 1123226
Other names: S. kuerlensis DSM 22868, Saccharibacillus kuerlensis DSM 22868
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.