STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378165_01041Unannotated protein. (474 aa)    
Predicted Functional Partners:
GCA_000378165_01040
Unannotated protein.
 
    
0.558
GCA_000378165_01042
Unannotated protein.
       0.489
GCA_000378165_01043
Unannotated protein.
       0.489
GCA_000378165_01044
Unannotated protein.
       0.456
GCA_000378165_00717
Unannotated protein.
     
 0.413
GCA_000378165_00775
Unannotated protein.
   
  0.400
GCA_000378165_01009
Unannotated protein.
   
  0.400
GCA_000378165_01667
Unannotated protein.
   
  0.400
GCA_000378165_01712
Unannotated protein.
   
  0.400
GCA_000378165_01756
Unannotated protein.
   
  0.400
Your Current Organism:
Saccharibacter floricola
NCBI taxonomy Id: 1123227
Other names: S. floricola DSM 15669, Saccharibacter floricola DSM 15669
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.