STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378165_01557Unannotated protein. (181 aa)    
Predicted Functional Partners:
GCA_000378165_01551
Unannotated protein.
    
  0.557
GCA_000378165_01556
Unannotated protein.
       0.553
GCA_000378165_00536
Unannotated protein.
      0.523
GCA_000378165_00988
Unannotated protein.
    
  0.485
GCA_000378165_01707
Unannotated protein.
    
  0.449
GCA_000378165_00170
Unannotated protein.
    
  0.446
GCA_000378165_00283
Unannotated protein.
    
  0.436
GCA_000378165_01136
Unannotated protein.
    
  0.426
GCA_000378165_00224
Unannotated protein.
   
 
  0.420
GCA_000378165_00489
Unannotated protein.
   
    0.400
Your Current Organism:
Saccharibacter floricola
NCBI taxonomy Id: 1123227
Other names: S. floricola DSM 15669, Saccharibacter floricola DSM 15669
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.