STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378165_01558Unannotated protein. (422 aa)    
Predicted Functional Partners:
GCA_000378165_00636
Unannotated protein.
 
  
 0.973
GCA_000378165_01559
Unannotated protein.
      0.951
GCA_000378165_00420
Unannotated protein.
 
  
 0.912
GCA_000378165_00107
Unannotated protein.
  
 
 0.896
GCA_000378165_00191
Unannotated protein.
    
  0.848
GCA_000378165_00635
Unannotated protein.
 
  
 0.843
GCA_000378165_00632
Unannotated protein.
 
   
 0.829
GCA_000378165_00630
Unannotated protein.
 
   
 0.825
GCA_000378165_00629
Unannotated protein.
 
   
 0.821
GCA_000378165_00634
Unannotated protein.
 
   
 0.813
Your Current Organism:
Saccharibacter floricola
NCBI taxonomy Id: 1123227
Other names: S. floricola DSM 15669, Saccharibacter floricola DSM 15669
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.