STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423605_00826Unannotated protein. (158 aa)    
Predicted Functional Partners:
GCA_000423605_00825
Unannotated protein.
 0.999
GCA_000423605_00827
Unannotated protein.
 0.999
GCA_000423605_00222
Unannotated protein.
 
  
  0.984
GCA_000423605_00820
Unannotated protein.
 
 
 0.938
GCA_000423605_00821
Unannotated protein.
 
 
 0.930
GCA_000423605_00819
Unannotated protein.
 
 
 0.921
GCA_000423605_00824
Unannotated protein.
 
  
  0.917
GCA_000423605_00221
Unannotated protein.
 
 
 0.862
GCA_000423605_00822
Unannotated protein.
 
     0.796
GCA_000423605_00823
Unannotated protein.
 
   
 0.684
Your Current Organism:
Saccharospirillum impatiens
NCBI taxonomy Id: 1123228
Other names: S. impatiens DSM 12546, Saccharospirillum impatiens DSM 12546
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.