STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423605_03407Unannotated protein. (366 aa)    
Predicted Functional Partners:
GCA_000423605_00916
Unannotated protein.
  
  
  0.784
GCA_000423605_00915
Unannotated protein.
    
  0.755
GCA_000423605_02239
Unannotated protein.
    
  0.755
GCA_000423605_03408
Unannotated protein.
       0.543
GCA_000423605_03445
Unannotated protein.
    
   0.529
GCA_000423605_02786
Unannotated protein.
  
  
  0.524
GCA_000423605_01436
Unannotated protein.
    
  0.406
Your Current Organism:
Saccharospirillum impatiens
NCBI taxonomy Id: 1123228
Other names: S. impatiens DSM 12546, Saccharospirillum impatiens DSM 12546
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.