STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429045_00419Unannotated protein. (416 aa)    
Predicted Functional Partners:
GCA_000429045_00417
Unannotated protein.
 
 0.973
GCA_000429045_00418
Unannotated protein.
  0.968
GCA_000429045_00415
Unannotated protein.
 
  0.935
GCA_000429045_00416
Unannotated protein.
 
     0.922
GCA_000429045_00414
Unannotated protein.
 
    0.895
GCA_000429045_00421
Unannotated protein.
 
     0.882
GCA_000429045_03330
Unannotated protein.
 
 0.880
GCA_000429045_00420
Unannotated protein.
 
     0.849
GCA_000429045_03329
Unannotated protein.
  0.826
GCA_000429045_02994
Unannotated protein.
 
 0.775
Your Current Organism:
Salinarimonas rosea
NCBI taxonomy Id: 1123229
Other names: Rhizobiales bacterium YIM YD3, S. rosea DSM 21201, Salinarimonas rosea DSM 21201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.