STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429045_00705Unannotated protein. (370 aa)    
Predicted Functional Partners:
GCA_000429045_01126
Unannotated protein.
  
  
 0.940
GCA_000429045_00320
Unannotated protein.
 
  
 0.933
GCA_000429045_04516
Unannotated protein.
  
  
 0.926
GCA_000429045_01951
Unannotated protein.
   
  
 0.919
GCA_000429045_04515
Unannotated protein.
  
  
 0.875
GCA_000429045_03645
Unannotated protein.
 
  
 0.870
GCA_000429045_03832
Unannotated protein.
  
  
 0.869
GCA_000429045_00153
Unannotated protein.
  
  
 0.850
GCA_000429045_03423
Unannotated protein.
  
  
 0.850
GCA_000429045_00599
Unannotated protein.
  
  
 0.837
Your Current Organism:
Salinarimonas rosea
NCBI taxonomy Id: 1123229
Other names: Rhizobiales bacterium YIM YD3, S. rosea DSM 21201, Salinarimonas rosea DSM 21201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.