STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429045_02918Unannotated protein. (799 aa)    
Predicted Functional Partners:
GCA_000429045_04084
Unannotated protein.
 0.998
GCA_000429045_04392
Unannotated protein.
 
 0.996
GCA_000429045_02916
Unannotated protein.
 
 
  0.978
GCA_000429045_02915
Unannotated protein.
 
 
  0.976
GCA_000429045_02914
Unannotated protein.
 
 
  0.947
GCA_000429045_03992
Unannotated protein.
 
 
 0.913
GCA_000429045_03001
Unannotated protein.
  
 0.886
GCA_000429045_03571
Unannotated protein.
  
 0.886
GCA_000429045_02460
Unannotated protein.
 
  
  0.877
GCA_000429045_02461
Unannotated protein.
 
  
  0.865
Your Current Organism:
Salinarimonas rosea
NCBI taxonomy Id: 1123229
Other names: Rhizobiales bacterium YIM YD3, S. rosea DSM 21201, Salinarimonas rosea DSM 21201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.