STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429045_03245Unannotated protein. (163 aa)    
Predicted Functional Partners:
GCA_000429045_03244
Unannotated protein.
 
     0.775
GCA_000429045_04611
Unannotated protein.
  
     0.685
GCA_000429045_02346
Unannotated protein.
  
     0.589
GCA_000429045_00786
Unannotated protein.
  
     0.571
GCA_000429045_03645
Unannotated protein.
  
     0.542
GCA_000429045_00110
Unannotated protein.
  
     0.522
GCA_000429045_02195
Unannotated protein.
  
     0.513
GCA_000429045_02369
Unannotated protein.
  
     0.508
GCA_000429045_00673
Unannotated protein.
  
     0.502
GCA_000429045_03990
Unannotated protein.
  
     0.465
Your Current Organism:
Salinarimonas rosea
NCBI taxonomy Id: 1123229
Other names: Rhizobiales bacterium YIM YD3, S. rosea DSM 21201, Salinarimonas rosea DSM 21201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.