STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429045_04179Unannotated protein. (390 aa)    
Predicted Functional Partners:
GCA_000429045_04180
Unannotated protein.
 
     0.794
GCA_000429045_04170
Unannotated protein.
 
     0.683
GCA_000429045_04178
Unannotated protein.
       0.642
GCA_000429045_01080
Unannotated protein.
 
     0.582
GCA_000429045_01930
Unannotated protein.
  
     0.551
GCA_000429045_01078
Unannotated protein.
 
     0.490
GCA_000429045_02261
Unannotated protein.
  
     0.467
GCA_000429045_03889
Unannotated protein.
  
     0.425
GCA_000429045_00692
Unannotated protein.
  
     0.421
GCA_000429045_02087
Unannotated protein.
  
     0.420
Your Current Organism:
Salinarimonas rosea
NCBI taxonomy Id: 1123229
Other names: Rhizobiales bacterium YIM YD3, S. rosea DSM 21201, Salinarimonas rosea DSM 21201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.