STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429045_04466Unannotated protein. (375 aa)    
Predicted Functional Partners:
GCA_000429045_04476
Unannotated protein.
 
  
 0.770
GCA_000429045_01865
Unannotated protein.
    
   0.742
GCA_000429045_02508
Unannotated protein.
    
   0.742
GCA_000429045_02151
Unannotated protein.
 
   
 0.738
GCA_000429045_04477
Unannotated protein.
    
 0.725
GCA_000429045_01001
Unannotated protein.
    
 0.724
GCA_000429045_02688
Unannotated protein.
  
  
0.699
GCA_000429045_04539
Unannotated protein.
    
 0.690
GCA_000429045_00784
Unannotated protein.
  
  
0.666
GCA_000429045_03578
Unannotated protein.
  
 0.660
Your Current Organism:
Salinarimonas rosea
NCBI taxonomy Id: 1123229
Other names: Rhizobiales bacterium YIM YD3, S. rosea DSM 21201, Salinarimonas rosea DSM 21201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.