STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429045_04777Unannotated protein. (253 aa)    
Predicted Functional Partners:
GCA_000429045_04776
Unannotated protein.
  
 0.984
GCA_000429045_01144
Unannotated protein.
  
 0.979
GCA_000429045_00004
Unannotated protein.
  
 0.808
GCA_000429045_02488
Unannotated protein.
    
 0.781
GCA_000429045_04549
Unannotated protein.
     
 0.753
GCA_000429045_04774
Unannotated protein.
 
    
0.604
GCA_000429045_02479
Unannotated protein.
    
 0.511
GCA_000429045_04775
Unannotated protein.
  
  
 0.509
GCA_000429045_00801
Unannotated protein.
  
 
 0.507
GCA_000429045_00172
Unannotated protein.
    
 0.468
Your Current Organism:
Salinarimonas rosea
NCBI taxonomy Id: 1123229
Other names: Rhizobiales bacterium YIM YD3, S. rosea DSM 21201, Salinarimonas rosea DSM 21201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.