STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000385175_01847Unannotated protein. (499 aa)    
Predicted Functional Partners:
GCA_000385175_01846
Unannotated protein.
 
 
 0.988
GCA_000385175_02628
Unannotated protein.
 
  
 0.910
GCA_000385175_01848
Unannotated protein.
 
  
 0.722
GCA_000385175_01845
Unannotated protein.
 
  
 0.625
GCA_000385175_02119
Unannotated protein.
 
 
 0.596
GCA_000385175_01849
Unannotated protein.
 
  
 0.591
GCA_000385175_02727
Unannotated protein.
    
 
 0.514
GCA_000385175_01883
Unannotated protein.
     
 0.476
GCA_000385175_02408
Unannotated protein.
     
 0.476
GCA_000385175_01871
Unannotated protein.
 
 
 
 0.459
Your Current Organism:
Salinicoccus albus
NCBI taxonomy Id: 1123230
Other names: S. albus DSM 19776, Salinicoccus albus DSM 19776, Salinicoccus albus YIM-Y21, Staphylococcaceae bacterium YIM-Y21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.