STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL57469.1Transcriptional regulator, BadM/Rrf2 family. (138 aa)    
Predicted Functional Partners:
SHL57433.1
2-octaprenylphenol hydroxylase.
       0.709
SHL57506.1
Putative ATPase.
       0.618
SHL57196.1
Cysteine desulfurase.
 
 
 0.610
SHM02659.1
Nitrogen fixation protein NifU.
 
  
 0.551
SHL43288.1
Cysteine desulfurase.
  
 
 0.548
SHM55629.1
Cysteine desulfurase.
  
 
 0.548
SHL69612.1
Nitric oxide dioxygenase; Belongs to the globin family.
     
 0.456
SHM18794.1
Peroxiredoxin family protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.426
Your Current Organism:
Salinicoccus alkaliphilus
NCBI taxonomy Id: 1123231
Other names: S. alkaliphilus DSM 16010, Salinicoccus alkaliphilus DSM 16010, Salinicoccus alkaliphilus T8, Salinicoccus alkaliphilus str. DSM 16010, Salinicoccus alkaliphilus strain DSM 16010, unidentified Hailaer soda lake bacterium T8
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.