STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM40167.1Phospholipase/carboxylesterase. (213 aa)    
Predicted Functional Partners:
SHM40203.1
Glyoxalase family protein.
    0.948
SHM64999.1
Glyoxalase family protein.
 
    0.927
SHM45964.1
Glyoxalase family protein.
 
    0.844
SHM64970.1
Glyoxalase family protein.
 
    0.820
SHM65033.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
    0.430
Your Current Organism:
Salinicoccus alkaliphilus
NCBI taxonomy Id: 1123231
Other names: S. alkaliphilus DSM 16010, Salinicoccus alkaliphilus DSM 16010, Salinicoccus alkaliphilus T8, Salinicoccus alkaliphilus str. DSM 16010, Salinicoccus alkaliphilus strain DSM 16010, unidentified Hailaer soda lake bacterium T8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.