STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378185_00740Unannotated protein. (58 aa)    
Predicted Functional Partners:
GCA_000378185_00741
Unannotated protein.
  
    0.845
GCA_000378185_03109
Unannotated protein.
 
    0.821
GCA_000378185_00745
Unannotated protein.
  
    0.731
GCA_000378185_03421
Unannotated protein.
   
    0.482
GCA_000378185_01114
Unannotated protein.
  
    0.481
GCA_000378185_01968
Unannotated protein.
  
    0.481
GCA_000378185_00739
Unannotated protein.
       0.460
Your Current Organism:
Salinimonas chungwhensis
NCBI taxonomy Id: 1123236
Other names: S. chungwhensis DSM 16280, Salinimonas chungwhensis BH030046, Salinimonas chungwhensis DSM 16280
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.