STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378185_01226Unannotated protein. (324 aa)    
Predicted Functional Partners:
GCA_000378185_01708
Unannotated protein.
     
 0.907
GCA_000378185_01238
Unannotated protein.
    
 0.897
GCA_000378185_03300
Unannotated protein.
    
 0.897
GCA_000378185_00167
Unannotated protein.
   
 0.839
GCA_000378185_01337
Unannotated protein.
   
 0.839
GCA_000378185_00175
Unannotated protein.
   
   0.807
GCA_000378185_02446
Unannotated protein.
   
   0.807
GCA_000378185_01225
Unannotated protein.
       0.800
GCA_000378185_01224
Unannotated protein.
       0.773
GCA_000378185_00601
Unannotated protein.
  
     0.640
Your Current Organism:
Salinimonas chungwhensis
NCBI taxonomy Id: 1123236
Other names: S. chungwhensis DSM 16280, Salinimonas chungwhensis BH030046, Salinimonas chungwhensis DSM 16280
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.