STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378185_02463Unannotated protein. (401 aa)    
Predicted Functional Partners:
GCA_000378185_02459
Unannotated protein.
 
 0.999
GCA_000378185_02460
Unannotated protein.
 
 0.999
GCA_000378185_02461
Unannotated protein.
 
 0.999
GCA_000378185_02462
Unannotated protein.
 
 0.999
GCA_000378185_02464
Unannotated protein.
 0.999
GCA_000378185_02458
Unannotated protein.
 
   
 0.882
GCA_000378185_02457
Unannotated protein.
 
     0.774
GCA_000378185_03143
Unannotated protein.
  
   
 0.639
GCA_000378185_03138
Unannotated protein.
  
   
 0.627
GCA_000378185_00133
Unannotated protein.
 
     0.481
Your Current Organism:
Salinimonas chungwhensis
NCBI taxonomy Id: 1123236
Other names: S. chungwhensis DSM 16280, Salinimonas chungwhensis BH030046, Salinimonas chungwhensis DSM 16280
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.