STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378185_02869Unannotated protein. (382 aa)    
Predicted Functional Partners:
GCA_000378185_01079
Unannotated protein.
      0.912
GCA_000378185_01742
Unannotated protein.
 
  
 0.784
GCA_000378185_02870
Unannotated protein.
       0.665
GCA_000378185_02871
Unannotated protein.
       0.591
GCA_000378185_02167
Unannotated protein.
     
 0.536
GCA_000378185_02872
Unannotated protein.
       0.536
GCA_000378185_00597
Unannotated protein.
    
  0.515
GCA_000378185_01944
Unannotated protein.
    
 0.472
GCA_000378185_02874
Unannotated protein.
     
 0.471
GCA_000378185_02873
Unannotated protein.
       0.455
Your Current Organism:
Salinimonas chungwhensis
NCBI taxonomy Id: 1123236
Other names: S. chungwhensis DSM 16280, Salinimonas chungwhensis BH030046, Salinimonas chungwhensis DSM 16280
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.