STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378185_03300Unannotated protein. (332 aa)    
Predicted Functional Partners:
GCA_000378185_01238
Unannotated protein.
     
 0.909
GCA_000378185_01226
Unannotated protein.
    
 0.897
GCA_000378185_00754
Unannotated protein.
  
  
 0.830
GCA_000378185_03074
Unannotated protein.
    
  0.747
GCA_000378185_02389
Unannotated protein.
   
 
  0.743
GCA_000378185_03107
Unannotated protein.
 
  
  0.691
GCA_000378185_01753
Unannotated protein.
  
 
 0.649
GCA_000378185_03306
Unannotated protein.
  
 
 0.642
GCA_000378185_00996
Unannotated protein.
    
  0.600
GCA_000378185_02840
Unannotated protein.
    
  0.600
Your Current Organism:
Salinimonas chungwhensis
NCBI taxonomy Id: 1123236
Other names: S. chungwhensis DSM 16280, Salinimonas chungwhensis BH030046, Salinimonas chungwhensis DSM 16280
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.