STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377705_00244Unannotated protein. (465 aa)    
Predicted Functional Partners:
GCA_000377705_00331
Unannotated protein.
 
 
 0.947
GCA_000377705_00335
Unannotated protein.
 
 0.927
GCA_000377705_01773
Unannotated protein.
 
 
 0.905
GCA_000377705_01661
Unannotated protein.
 
 
 0.903
GCA_000377705_00333
Unannotated protein.
  
 0.889
GCA_000377705_01265
Unannotated protein.
    
 0.756
GCA_000377705_01519
Unannotated protein.
  
 0.717
GCA_000377705_00332
Unannotated protein.
 
 
 0.694
GCA_000377705_02614
Unannotated protein.
 
 
  0.688
GCA_000377705_03009
Unannotated protein.
 
 
  0.679
Your Current Organism:
Salsuginibacillus kocurii
NCBI taxonomy Id: 1123239
Other names: S. kocurii DSM 18087, Salsuginibacillus kocurii DSM 18087
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.