STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426645_00041Unannotated protein. (390 aa)    
Predicted Functional Partners:
GCA_000426645_00040
Unannotated protein.
 
  
 0.967
GCA_000426645_01257
Unannotated protein.
  
 
 0.966
GCA_000426645_04467
Unannotated protein.
   
 0.898
GCA_000426645_01254
Unannotated protein.
  
 0.892
GCA_000426645_01452
Unannotated protein.
  
 0.842
GCA_000426645_01255
Unannotated protein.
  
  
 0.837
GCA_000426645_01259
Unannotated protein.
 
 0.810
GCA_000426645_04469
Unannotated protein.
    
  0.798
GCA_000426645_04392
Unannotated protein.
  
 0.761
GCA_000426645_00891
Unannotated protein.
   
 
 0.669
Your Current Organism:
Nakamurella lactea
NCBI taxonomy Id: 1123241
Other names: N. lactea DSM 19367, Nakamurella lactea DLS-10, Nakamurella lactea DSM 19367, Nakamurella lactea KCTC 19285, Saxeibacter lacteus DSM 19367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.