STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426645_01799Unannotated protein. (244 aa)    
Predicted Functional Partners:
GCA_000426645_01797
Unannotated protein.
       0.773
GCA_000426645_01798
Unannotated protein.
       0.773
GCA_000426645_01698
Unannotated protein.
  
     0.743
GCA_000426645_01031
Unannotated protein.
  
     0.696
GCA_000426645_00122
Unannotated protein.
  
     0.672
GCA_000426645_01699
Unannotated protein.
  
     0.647
GCA_000426645_02926
Unannotated protein.
  
     0.615
GCA_000426645_03399
Unannotated protein.
  
     0.603
GCA_000426645_01796
Unannotated protein.
 
     0.588
GCA_000426645_00741
Unannotated protein.
  
     0.581
Your Current Organism:
Nakamurella lactea
NCBI taxonomy Id: 1123241
Other names: N. lactea DSM 19367, Nakamurella lactea DLS-10, Nakamurella lactea DSM 19367, Nakamurella lactea KCTC 19285, Saxeibacter lacteus DSM 19367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.