STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426645_04082Unannotated protein. (204 aa)    
Predicted Functional Partners:
GCA_000426645_04092
Unannotated protein.
 
 0.999
GCA_000426645_04083
Unannotated protein.
 
  
 0.992
GCA_000426645_00479
Unannotated protein.
  
 0.909
GCA_000426645_00480
Unannotated protein.
  
 0.909
GCA_000426645_00716
Unannotated protein.
  
 0.909
GCA_000426645_00997
Unannotated protein.
  
 0.909
GCA_000426645_01518
Unannotated protein.
  
 0.909
GCA_000426645_02206
Unannotated protein.
  
 0.909
GCA_000426645_02723
Unannotated protein.
  
 0.909
GCA_000426645_03120
Unannotated protein.
  
 0.909
Your Current Organism:
Nakamurella lactea
NCBI taxonomy Id: 1123241
Other names: N. lactea DSM 19367, Nakamurella lactea DLS-10, Nakamurella lactea DSM 19367, Nakamurella lactea KCTC 19285, Saxeibacter lacteus DSM 19367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.