STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000255655_05486Unannotated protein. (165 aa)    
Predicted Functional Partners:
GCA_000255655_00746
Unannotated protein.
    
 0.984
GCA_000255655_02634
Unannotated protein.
 
  
 0.902
GCA_000255655_06870
Unannotated protein.
 
  
 0.897
GCA_000255655_06490
Unannotated protein.
   
 
 0.884
GCA_000255655_05409
Unannotated protein.
   
   0.876
GCA_000255655_05939
Unannotated protein.
  
    0.807
GCA_000255655_03148
Unannotated protein.
  
  
 0.755
GCA_000255655_02392
Unannotated protein.
  
  
 0.753
GCA_000255655_05439
Unannotated protein.
   
   0.695
GCA_000255655_05438
Unannotated protein.
   
   0.694
Your Current Organism:
Schlesneria paludicola
NCBI taxonomy Id: 1123242
Other names: S. paludicola DSM 18645, Schlesneria paludicola DSM 18645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.