STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000255655_05770Unannotated protein. (118 aa)    
Predicted Functional Partners:
GCA_000255655_04326
Unannotated protein.
   
 
 0.929
GCA_000255655_06490
Unannotated protein.
    
 
 0.920
GCA_000255655_05438
Unannotated protein.
    
   0.917
GCA_000255655_05409
Unannotated protein.
    
   0.913
GCA_000255655_02535
Unannotated protein.
   
   0.896
GCA_000255655_05439
Unannotated protein.
    
   0.884
GCA_000255655_02919
Unannotated protein.
  
 
 0.850
GCA_000255655_05986
Unannotated protein.
  
 
 0.850
GCA_000255655_00175
Unannotated protein.
    
   0.717
GCA_000255655_00581
Unannotated protein.
    
   0.717
Your Current Organism:
Schlesneria paludicola
NCBI taxonomy Id: 1123242
Other names: S. paludicola DSM 18645, Schlesneria paludicola DSM 18645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.